Analysis of free analyte fractions by rapid affinity chromatography

ABSTRACT

The invention is generally directed toward an analytical method to determine the concentration of the free analyte fraction in a sample. More particularly, the method encompasses applying a sample comprising a free and bound analyte fraction to an affinity column capable of selectively extracting the free fraction in the millisecond time domain. The signal generated by the free fraction is then quantified by standard analytical detection techniques. The concentration of the free fraction may then be determined by comparison of its signal with that of a calibration curve depicting the signal of known concentration of the same analyte.

FIELD OF THE INVENTION

[0001] The invention is directed toward an analytical method todetermine the concentration of the free analyte fraction in a sample.More particularly, the method encompasses the use of affinitychromatography to determine the concentration of the free analytefraction in a sample.

BACKGROUND OF THE INVENTION

[0002] Many drugs, hormones, and toxins exist in two distinct forms asthey pass through the blood stream: 1) a fraction that is non-covalentlybound to proteins or other blood components and 2) a fraction that isnon-bound, or free, in solution. The free and bound fractions arepresent in a dynamic state, in which solutes in one state arecontinually exchanging with those in the other. Accordingly, inbiological systems this process is constant and an equilibrium is formedbetween the free and bound fractions.

[0003] It has long been hypothesized that the free fraction of suchsubstances is the biologically-active form, since it is this form whichcrosses cell membranes and interacts with cell receptors or other targetligands. Because the free fraction is the biologically-active form, thismakes analysis of free fractions of these substances of particularinterest in clinical chemistry and pharmaceutical science as a means forcontrolling and studying their effects within the body.

[0004] For many substances it is possible to use their totalconcentrations in blood or serum as estimates of their free levels byassuming there is a constant relationship between these two types ofvalues. However, there are numerous situations where this approach doesnot provide meaningful, or even remotely accurate information. Forexample, after surgery, during malnutrition or pregnancy, and in variousdisease states (e.g., cancer, renal failure or liver disease) there canbe a large fluctuation in the concentration of binding proteins presentin blood. This can shift the equilibrium between these proteins anddrugs that bind to them and concomitantly cause a change in a drug'sfree fraction even though its total concentration remains unaffected.Similar shifts in drug-protein binding can occur with age (e.g., innewborns or the elderly) and in situations where several drugs and/orendogenous agents compete for the same binding proteins. A drug with ahigh total concentration versus its binding proteins also createsproblems when trying to estimate the free fraction based upon totalprotein concentrations since this may result in a -non-linearrelationship between the drug's total and free levels.

[0005] Although several analytical methods have been developed in anattempt to determine the free fraction, all of these methods are plaguedwith inherent inaccuracies or are lengthy and tedious to perform.Examples of these methods include equilibrium dialysis, ultrafiltrationand the use of natural filtrates, such as tears or saliva. A majorproblem with these techniques is that the analysis often involves theuse of an additional binding reagent or separation process thatinteracts with the free or bound fraction and causes the equilibriumbetween these fractions to be altered. For example, techniques with longanalysis times, on the order of several seconds, results in bias in themeasurement process because it allows the release of a significantamount of solutes from the bound fraction which is then detected withthe original free fraction. The end result is an error in the apparentconcentration of free fraction that is measured. In addition, many ofthese techniques suffer from non-specific interactions (e.g., binding ofdrugs to dialysis or filtration membranes), and are limited to onlycertain types of analytes (as is the case with natural filtrates).

[0006] Accordingly, a need exists to determine the free fraction withoutimpacting the equilibrium between the free and bound fractions of thesolutes. Equally, a need exists for a method that is highly specific andcan be employed to determine the free fraction of a vast number ofdifferent substances.

SUMMARY OF THE INVENTION

[0007] Among the several aspects of the invention therefore, is provideda method to determine the concentration of a free analyte fraction in asample, the sample comprising a bound analyte fraction and the freeanalyte fraction, the method comprising applying the sample to anaffinity column wherein the column separates the free analyte fractionfrom the sample in the millisecond time domain, detection of signal fromthe free analyte fraction separated from the sample, and determining theconcentration of free analyte present in the sample.

[0008] In yet another aspect of the invention is provided a method todetermine the concentration of a free analyte fraction in a sample, thesample comprising a bound analyte fraction and a free analyte fraction,the method comprising applying the sample to an affinity column, thecolumn separating the sample into the free analyte fraction and thebound analyte fraction in the millisecond time domain wherein the freeanalyte fraction is adsorbed to the column and the bound analytefraction passes through the column, applying a series of standards tothe affinity column wherein each standard applied comprises a knownconcentration of the same free analyte present in the sample, the columnseparating each of the standards into a free fraction and a boundfraction in the millisecond time domain wherein the free fraction isadsorbed to the column and the bound fraction passes through the column,detection of signal from the free analyte fraction separated from thesample in (a) above, detection of signal from the free analyte fractionseparated from the standard in (b) above, generating a calibration curvebased upon the signal detected in (d) above, the curve comprising agraph of the concentration of free analyte present in each standardversus the signal detected for each concentration, and determining theconcentration of the free analyte fraction present in the sample bycomparing the signal detected in (c) above with the calibration curve in(e) above.

[0009] Yet a further aspect of the invention provides a method todetermine the concentration of a free analyte fraction in a sample, thesample comprising a bound analyte fraction and a free analyte fraction,the method comprising applying the sample to an affinity column, thecolumn separating the sample into the free analyte fraction and thebound analyte fraction in the millisecond time domain wherein the freeanalyte fraction is adsorbed to the column and the bound analytefraction passes through the column, applying the sample set forth in (a)to an inert control -column wherein the free analyte fraction does notadsorb to the column and a total analyte fraction comprising the freeanalyte fraction and the bound analyte fraction passes through thecolumn, applying a series of standards to the affinity column whereineach standard applied comprises a known concentration of the sameanalyte present in the sample, the column separating each of thestandards into a free fraction and a bound fraction in the millisecondtime domain wherein the free fraction is adsorbed to the column and thebound fraction passes through the column, applying the same series ofstandards set forth in (c) to an inert control column wherein the freeanalyte fraction does not adsorb to the column and a total analytefraction comprising the free analyte fraction and the bound analytefraction passes through the column, detection of signal from the boundanalyte fraction of the sample in (a) above, detection of signal fromthe total analyte fraction of the sample in (b) above, detection ofsignal from the bound fraction of the standard in (c) above, detectionof signal from the total analyte fraction of the standard in (d) above,generating a calibration curve based upon the signal detected in (g)above, the curve comprising a graph of the bound concentration ofanalyte present in each standard versus the signal detected for eachconcentration, generating a calibration curve based upon the signaldetected in (h) above, the curve comprising a graph of the totalconcentration of analyte present in each standard versus the signaldetected for each concentration, determining the bound analyte fractionin the samples by comparing the signal in (e) above with the calibrationcurve in (i) above, determining the total analyte fraction in thesamples by comparing the signal in (f) above with the calibration curvein (j) above, and determining the concentration of the free analytefraction present in the sample by subtracting the bound analyte fractionin (k) above from the total analyte fraction in (1) above.

[0010] Still another aspect of the invention provides a method todetermine the concentration of a free analyte fraction in a sample, thesample comprising a bound analyte fraction and the free analytefraction, the method comprising applying the sample to an affinitycolumn wherein the column separates the free analyte fraction from thesample in the millisecond time domain, detection of signal from the freeanalyte fraction separated from the sample and comparing the signaldetected in (b) to a standard thereby determining the concentration offree analyte present in the sample.

BRIEF DESCRIPTION OF THE DRAWINGS

[0011] These and other features, aspects, and advantages of the presentinvention will become better understood with regard to the followingdescription, appended claims and accompanying figures where:

[0012]FIG. 1 depicts a drawing of a typical microcolumn that may beemployed in the method of the invention.

[0013]FIG. 2 depicts change in column void time with column length andsolvent flow rate for 2 mm ID HPLC columns packed with porous silica.These results assume an overall porosity of 0.80 within the column(i.e., 80% of the column volume is occupied by the mobile phase). Usinga column with an inner diameter of 1 mm or 4 mm gives similar resultsbut with the vertical position of the lines in this graph being loweredor raised by 4-fold, respectively.

[0014]FIG. 3 depicts the reproducibility of stationary phase content ina sandwich microcolumn as a function of the number of injections whichwere used to apply a fixed amount of an immobilized hemoglobin supportto a 2.1 mm ID×620 μm microcolumn. These results represent the averageof triplicate analyses.

[0015]FIG. 4 depicts release of protein-bound S-warfarin following theinstantaneous removal of this drug's free fraction from an equilibriummixture of S-warfarin and HSA. The graph in (a) shows the progression ofthis reaction over ten seconds, while the plot in (b) shows an expandedview on the sub-second time scale. These graphs were generated for astarting mixture that contained 4.56×10⁻⁵ M HSA and 1.1×10⁻⁵M S-warfarinat 25° C. An equilibrium constant of 3.4×10⁵ M-⁻¹ was used to determinethe initial amount of free warfarin in this sample. A first-order rateconstant of 0.14 s⁻¹ was used to describe the dissociation of S-warfarinfrom HSA.

[0016]FIG. 5 depicts chromatograms for the injection of a 20 μL sampleof 8×10⁻⁷ M R-warfarin onto (a) a diol-bonded silica column and (b) ananti-warfarin immunoaffinity column at a flow rate of 3.0 mL/min(effective column residence time, 60 ms). Other experimental conditionsare provided in the Materials and Methods of the Example section.

[0017]FIG. 6 depicts a schematic of a chromatographic system for theextraction and measurement of free and protein-bound warfarin. Detailson the construction of this system can be found in the Materials andMethods of the Example section.

[0018]FIG. 7 depicts a chromatogram for separation of HSA fromR-warfarin after the passage of these compounds as a mixture through ananti-warfarin immunoaffinity microcolumn. The initial sample contained1.1×10⁻⁵ M R-warfarin and 4.5×10⁻⁵ M HSA. Other conditions are providedin the text.

[0019]FIG. 8 depicts simulated extraction of free warfarin from amixture of R-warfarin and HSA. The sample and column conditions used ingenerating this plot were the same as those that were present for theexperimental results in FIG. 7. The solid bottom line indicates therelative amount of free warfarin that was extracted in the absence ofHSA. The solid top line shows the amount of warfarin that was extractedfrom warfarin/HSA mixtures when the bound warfarin was allowed todissociate from and rebind to HSA as the sample passed through thecolumn. The dashed line is shown for reference and represents a case inwhich the amount of extracted warfarin was identical to the amount offree warfarin in the injected samples. These simulations were based onassociation and dissociation rate constants of 1×10⁻⁵ M⁻¹ s⁻¹ and 0.4s⁻¹ for the interactions of R-warfarin with HSA at 25° C. The adsorptionof warfarin to the immunoaffinity column was described by using a columnbinding capacity of 5×10⁻¹¹ mol and a second-order association rateconstant of 1×10⁵ M⁻¹ sol.

[0020] Abbreviations and Definitions

[0021] To facilitate understanding of the invention, a number of termsand abbreviations as used herein are defined below:

[0022] “Analyte” or “Target Analyte” are used interchangeably herein,and shall mean the component of the sample that binds to the bindingagent present in the active layer of the microcolumn. The analyte willtypically comprise the free fraction of a drug, hormone, toxin, metalion, fatty acid, bilirubin or any other endogenous or exogenouscompound. Additionally, the analyte may also comprise any otherinorganic or organic compound capable of being separated from thesample, as described herein.

[0023] “Binding Agent”, as utilized herein, shall mean the agent in theactive layer capable of selectively binding the target analyte.

[0024] “Binding Compound”, as utilized herein, shall mean the compoundthat the bound fraction binds. Typically, the binding compound comprisesa protein, cell or any other endogenous or exogenous compound.

[0025] “Bound Fraction” or “Bound Analyte Fraction” are usedinterchangeably herein, and shall mean the portion of the analyte whichis bound to a binding compound.

[0026] “Free Fraction” or “Free Analyte Fraction” are usedinterchangeably herein, and shall mean the portion of the analyte whichis not bound to a binding compound.

[0027] “Millisecond Time Domain”, as utilized herein, shall mean anyamount of time less than one second.

[0028] “Sandwich microcolumn”, as utilized herein, shall mean anembodiment of the invention wherein the microcolumn contains a top inertlayer, a bottom inert layer and an active layer between the two inertlayers.

[0029] “Sample” or “Liquid” are used interchangeably herein and shallmean the mixture applied to the microcolumn containing the analyte. Inaddition to the analyte, the sample (liquid) generally also contains aloading buffer. Any loading buffer may be employed to the extent thatthe buffer does not interfere with the separation process. The samplemay comprise any mixture with an analyte. Typically, however, the samplewill be comprised of a biological fluid such as blood, plasma, urine,cerebrospinal fluid, tissue samples, or intracellular fluid.

[0030] “Uniform Manner”, as utilized herein, shall mean loading thelayers of the microcolumn in a manner such that these layers have asubstantially equal distribution of support in both a horizontal andvertical direction.

[0031] BSA=Bovine Serum Albumin

[0032] FPLC=Fast-Protein Liquid Chromatography

[0033] HPLC=High-Performance Liquid Chromatography

DESCRIPTION OF THE PREFERRED EMBODIMENTS

[0034] Many compounds, as stated above, exist in two distinct forms asthey pass through the blood stream: 1) a fraction that is non-covalentlybound to proteins or other binding compounds and 2) a fraction that isnon-bound, or free, in solution. The free and bound fractions arepresent in a dynamic state, in which solutes in one state arecontinually exchanging with those in the other. Applicants havediscovered a method to accurately determine the free analyte fraction ofa sample comprising a free analyte fraction and a bound analytefraction. The method of the present invention employs the use ofaffinity microcolumns to extract the free fraction of an analyte fromthe sample in the millisecond time domain. The capability of extractingthe free fraction in this time domain allows the free fraction to beseparated without impacting the equilibrium between the free and boundfractions. Applicants' discovery, accordingly, circumvents a majorproblem associated with the long separation times that plague currentdetection techniques. Upon its separation, the concentration of the freefraction is then determined employing standard analytical methods.

[0035] I. Affinity Microcolumn Design and Construction

[0036] The method of the present invention employs the use of amicrocolumn to separate the free fraction of an analyte from the samplein the millisecond time domain. As utilized herein, the terms“microcolumn” or “column” are used interchangeably and FIG. 1 depicts atypical microcolumn that may be employed in the method of the invention.As shown in FIG. 1, the microcolumn 1 generally has a tubularconfiguration with a first end 2, a second end 3, a passageway 4 therebetween, and a retaining means at the first 5 and second ends 6 of themicrocolumn 1. However, the microcolumn 1 may comprise any number ofdifferent shapes, all of which are embodiments of the present invention.The retaining means 5,6 typically comprises a mesh or small-porematerial that acts to hold the support particles within the column whileallowing fluid flow there through. The microcolumn 1 may also containend fittings at the first 7 and second 8 ends of the microcolumn 1 usedto connect the column to the chromatographic system. The microcolumn 1comprises a thin active layer 9 to facilitate separation of the analytefrom the sample in the millisecond time scale and typically a singleinert layer in one embodiment, to several inert layers in additionalembodiments. FIG. 1 illustrates an embodiment with a top inert layer 10and a bottom inert layer 11.

[0037] A salient feature of the current invention is the capability ofremoving a significant amount of the free fraction of a particularanalyte from a sample without release of the analyte from itsprotein-bound fraction. In order to accomplish this task, as delineatedabove, the extraction process is preferably accomplished in themillisecond time domain. The microcolumn design described herein isparticularly suitable for this application because, due in part to itsrelatively thin active layer, it can extract the free fraction withinthis time range. As utilized herein, “length” of a layer means thethickness or width of the layer. As illustrated by FIG. 2 (plot derivedby calculation), only columns with active layer lengths in the range ofabout 100 microns to about 1 millimeter allow separation in themillisecond time domain when employing standard HPLC flow rates of about0.1 to about 1.0 mL/min. Accordingly, to achieve separation in this timerange, the microcolumns employed generally comprise an active layer thatmay be less than about 10 microns in thickness. Typically, however, theactive layer is from about 10 microns to about 1.1 millimeters inthickness and preferably, is not less than approximately 60 microns inthickness. Applicants have found that active layers with thesedimensions, depending upon the specific sample applied, are generallycapable of extracting an analyte in about 1 to about 500 milliseconds.And, more preferably, in less than about 200 milliseconds.

[0038] In addition to rapid extraction of the free fraction, anadditional salient feature is the ability of the active layer to bindthe target analyte with both a high degree of selectivity and with arelatively high binding affinity. The active layer, therefore, typicallyis comprised of support particles derivatized with any binding agentpossessing selectivity and having a high binding affinity for the targetanalyte. Preferably, such binding affinity is from about 10² to about10⁶ M⁻¹ or greater. In a preferred embodiment, the binding agents areantibodies raised against the target analyte. The antibodies can beeither monoclonal or polyclonal. However, monoclonal antibodies aregenerally employed in applications where a higher degree of selectivityis desired and polyclonals are more typically utilized in applicationswhere a higher degree of binding affinity is desired. Examples of othersuitable binding agents include nucleic acid ligands (e.g. aptamers),synthetic molecular imprints, antibody fragments (e.g. Fab fragments),antibody related molecules (e.g. chimeras or F, chain fragments), andrecombinant proteins that act as antibody mimics. The binding agent,once selected, may be isolated in accordance with any generally knownmethod.

[0039] The binding agent can be derivatized to the support particles byany method generally known in the art. However, the method preferablyimmobilizes the binding agent to the support particle in a manner suchthat a relatively high percent of the binding agent is active (i.e.binds the target analyte) after the immobilization process. Suitableimmobilization methods for protein ligands, for example, include theSchiff base method and the carbonyldiimidazole method. The Schiff basemethod is generally employed when immobilizing the binding agent throughfree amine groups. However, when the binding agent comprises antibodies,applicants have found that a more preferred approach is immobilizationthrough the antibodies' carbohydrate region because this generallyresults in an active layer with a higher number of active binding sitescompared to when immobilization is performed through free amine groups.Any method known in the art for immobilization via carbohydrate regionsmay be employed.

[0040] Additionally, the overall binding capacity of the microcolumn isalso an important feature because it impacts both the time andefficiency of extraction by the active layer. The binding capacity ofthe column, in part, is determined by the number of active binding sitespresent in the active layer. Preferably, the minimum number of activebinding sites in the column comprises a ratio of active binding sites tofree analyte not less than about 1:1, and even more preferably, not lessthan about 10:1. However, still more preferably, support particles inthe active layer will be derivatized with the maximum concentration ofactive binding agent achievable so that the column has the largestbinding capacity possible.

[0041] The active layer, additionally, may comprise a number ofdifferent support particles. The support particles, as detailed above,function primarily as a surface to immobilize the binding agent. Thediameter of the particle, however, is an important feature that shouldbe considered because it impacts both the length of the active layer andthe amount of binding agent that may be immobilized in the active layer(i.e. binding capacity of the column). Preferably, the particle size issmaller than the length of the desired active layer. Applicants havefound that a preferred particle diameter is less than about 10 times toabout 20 times the length of the active layer because particles withinthis size range facilitate uniform packing of the layer by allowingsmall packing defects to average out and produce a more uniform packingcross-section for the support. In addition, the support particles shouldbe able to tolerate the flow rates and pressures needed in order toobtain the desired sample contact time with the active layer. Theproperties that affect the pressure and flow rate that may be toleratedby the support particles include the diameter of the particle, theparticle's shape and the porosity of the particles. Suitable supportparticles include porous or nonporous glass, silica and other inorganicsupports (e.g., alumina or zirconia), carbohydrate-based supports (e.g.,beaded agarose), and polymeric supports (e.g., polymethacryltate orpolystyrene based resins); however, one generally skilled in the art ofchromatography can select other appropriate support particles.

[0042] The microcolumn may comprise a single inert layer or severalinert layers, depending upon the application. However, common featuresshared by all inert layers, irrespective of their number or positionwithin the microcolumn, is that they typically should have nosubstantial interaction with the target analyte, and should preferablybe mechanically stable under the flow rate and pressures employed duringthe separation process. Preferable materials for construction of theinert layer include diol-bonded silica, diol-bonded glass beads, agarosebeads, hydroxylated perfusion media, and glycol coated perfusion media.The various inert layers may be constructed from the same supportparticles or different support particles. However, it is usuallypreferred for the sake of convenience in loading the microcolumn thatthe inert layers comprise the same support particles.

[0043] The layers in the microcolumn may comprise either an active layeralone, or an active layer and a single inert layer on top of the activelayer (wherein the active layer is in communication with the second endretaining means) such that liquid first passes through the inert layerand then passes through the active layer. The utilization of a singleinert layer in this manner is especially suitable for applications wherethe liquid (containing the sample) is to be applied in only a singledirection to the active layer and the column. The inert layer in thisapplication preferably occupies the entire length of the microcolumnbetween the beginning of the first end of the microcolumn to thebeginning of the active layer so that the entire microcolumn is filledwith support particles. Applicants have found that having the entiremicrocolumn filled with support particles increases both the speed andefficiency of separation. Additionally, the inert layer in thisapplication also preferably acts to distribute the injected sampleevenly across the diameter of the column before the sample reaches theactive layer. This allows for a more uniform application of the sampleto the relatively thin active layer.

[0044] The layers in the microcolumn may also comprise an active layersandwiched between a top and a bottom inert layer. As utilized herein,the term “top inert layer” shall mean the layer that liquid first passesthrough prior to reaching the active layer and “bottom inert layer”shall mean the layer where liquid passes after it exits the activelayer. The microcolumn preferably comprises both a top and bottom inertlayer for applications where liquid is to be applied in two directionsto the active layer and the column. At any given time, the flow ofliquid through the column is generally only in a single direction.However, it is sometimes preferable to alternate the flow of liquidthrough the column in order to help wash out any impurities that mayhave built up at the top of the column during the application of liquid.The top inert layer in this application serves the same role asdiscussed above for the application employing a single inert layer e.g.more efficient separation. However, applicants have found that it ispreferable to include the bottom inert layer, even in applications wherefluid flow is in only a single direction, because its inclusionincreases the useful life of the active layer by preventing loss ofsupport particles.

[0045] The thickness of the inert layers is not a critical feature anddoes not affect the time needed to separate the free fraction of ananalyte from the sample. In general, as stated above, the top inertlayer is preferably the length that remains between the beginning of thecolumn and the beginning of the active layer. And, the bottom inertlayer, if it is present, is generally from about 1 to about 5 times thelength of the active layer. Typically, the top inert layer is thickerthan the bottom inert layer.

[0046] The choice of a particular type of housing for the microcolumn isalso not a critical facet. The microcolumn housing, however, preferablyemploys components made of materials that are substantially inert tobiological fluids and in particular, substantially inert to the analyteso as not to interfere with the separation process. Accordingly, anymaterial that is substantially inert may be employed to construct themicrocolumn. Suitable materials include stainless steel, polypropylene,certain plastics and fused silica.

[0047] The dimensions of the microcolumn are also not a criticalfeature. Any size of microcolumn may be utilized to the extent that thetotal column length is preferably greater than the length of the activelayer. The total column length and diameter also preferably allow theuse of sufficiently fast flow rates and pressures to achieve the desiredcontact time between the sample and the active layer. Preferably, themicrocolumn has an internal diameter of about 50 microns to about 2centimeters and a length of about 0.2 millimeters to about 2centimeters. In a particularly preferred embodiment, the microcolumn hasan internal diameter of about 0.5 to about 2.1 millimeters and a lengthof about 1 millimeter to about 2 centimeters.

[0048] Applicants have found that thin active layers may preferentiallybe obtained by loading the support particles comprising the layer intothe microcolumn via a plurality of injections, as described in detailbelow (e.g. see FIG. 3). The normal method of loading a column, applyingthe support particles in one application to the column with the amountof support particles being in excess of that which is needed to fill thecolumn, is sufficient for standard size chromatography columns becausedue to their size, reliable packing of the support particles may beachieved. Applicants, however, have found that loading the supportparticles in a single injection, for columns with dimensions describedherein, generally does not result in an active layer capable ofconsistently achieving separation of an analyte from a sample in themillisecond time scale.

[0049] Accordingly, the layers are preferably loaded into the column bya plurality of injections of slurry comprising the support particles.The slurry may be injected into the column employing any apparatusgenerally known for injecting a slurry into a column, for example, aclosed-loop sample application system with either a manual injectionvalve or an automatic injection system may be utilized. The slurry, inaddition to support particles, also preferably comprises a packingsolvent or buffer. The packing solvent employed to load the slurry intothe column is not a critical feature; however, the solvent preferablywill not harm the binding agent present in the active layer. One skilledin the art of chromatography can readily select both an appropriateapparatus to inject the slurry and appropriate packing solvents.

[0050] Applicants have also found, as illustrated by FIG. 3, employing alarger number of injections and less support per injection, achieves amore controlled delivery of support particles because statisticalvariations that occur during the delivery of small amounts of supportparticles to the column are averaged out. This is particularly true aslayer thickness decreases. Uniform packing of support particles in thelayers, especially the active layer, is preferable because it providesmore reproducible results for injected samples by allowing parts of thesample that are injected at different locations along the diameter ofthe column to achieve consistent sample contact times with the activelayer. Accordingly, the number of injections to introduce a layer intothe column is generally from about 10 to about 100. More preferably, thenumber of injections to introduce a layer is from about 30 to about 40when the layer length is from about 100 to about 500 microns, and isfrom about 60 to about 80 injections when the layer length is from about60 to about 100 microns in length.

[0051] The slurry density (milligrams of support particles permilliliter of packing solvent), or amount of support particle applied tothe column per injection, will vary greatly depending upon the desiredthickness of the layer. Typically, however, the slurry density will befrom about 0.1 to about 20 milligrams of support particles permilliliter of packing solvent and more preferably, will be from about 1to about 5 milligrams of support particles per milliliter of packingsolvent. In general, the inert layer(s) and active layer are loaded atapproximately the same slurry density. One of ordinary skill in the artcan readily determine the appropriate slurry density needed to achieve alayer having a particular thickness when employing a specific number ofinjections.

[0052] The desired slurry density, once selected, is preferablymaintained throughout column injection in order to facilitate uniformlayer packing. To maintain consistent slurry density, the slurrytypically undergoes shaking between injections to ensure that thesupport particles are uniformly distributed in the slurry. It is alsopreferable to monitor the turbidity of the slurry at a wavelength ofapproximately 800 nm to ensure the amount of support particles permilliliter remains constant. Furthermore, typically the slurry densityis calculated at numerous points during injection by comparison toslurries of known density employing the same support particles.

[0053] Applicants have also found, in addition to loading the supportparticles by a plurality of injections, that varying the flow rate andpressure during column loading also serves to provide a more uniform andthin active layer. In a particularly preferred application, the pressureand flow rate are increased for a short period of time near thebeginning and end of the loading of each layer (as illustrated in Table1). This increased pressure and flow rate facilitates compression of thelayer and distributes the support particles within the layer evenlyacross the diameter of the column. In a typical column loadingprocedure, for example, the flow rate of slurry injection into thecolumn is between about 3 mL/min and about 5 mL/min, with the higherflow rate occurring generally at the beginning and end of the loading ofeach layer. Additionally, pressure during column loading is typicallymaintained between about 2000 and about 4000 psi, with a higher pressurepreferably occurring at the beginning and end of the loading of eachlayer. The particular flow rates and pressures utilized to load eachlayer of the column is not a critical feature and accordingly, may bevaried significantly from the general examples provided herein dependingupon the particular application.

[0054] Table 1 sets forth a general procedure for loading a 1.0 cmimmunoaffinity microcolumn comprising an active layer between a top andbottom inert layer. The procedure set forth in Table 1 is forillustrative purposes only and shall not be construed to limit the scopeof the present invention as described in greater detail herein. TABLE 1General Procedure for Preparing a Microcolumn 1 Assemble column fittingson the second end of the microcolumn (and retaining means) and attachthe microcolumn to the packing apparatus; 2 Make two particle supportslurries in the packing solvent, one consisting of inert supportparticles, and the other containing the active support particles. For animmunoaffinity microcolumn, the packing solvent employed may be pH 7.0,0.10 M potassium phosphate buffer and the slurry of the inert supportparticles typically may contain a diol-bonded material (e.g. 2 mg/mLdiol-bonded silica). The second slurry contains the immunoaffinitysupport particles at a concentration that is determined by utilizingequation 2 or any other generally known method (as set-forth in theexamples below) and the desired thickness of the final active layer 3Begin flow of the packing solvent through the column. This is generallydone at a rate of approximately 3 mL/min for immunoaffinitymicrocolumns, but is not critical. Make approximately five injections(at 150 uL per injection for a 1.0 cm long column) of the inert supportslurry, followed by an increase in flow rate to approximately 5 mL/minfor approximately 5 minutes 4 Return the flow rate to approximately 3mL/min and make the required number of injections of the active layer(per equation 2 or any other generally known method). After making theseinjections, increase the flow rate to approximately 5 mL/min forapproximately 5 minutes 5 Return the flow rate to approximately 3 mL/minand make enough injections of the inert support slurry to fill theremainder of the column bed 6 After the column bed has been filled,increase the column back- pressure to the desired level, typically about3000 to about 4000 psi. Allow the column to equilibrate at this pressurefor approximately 10 minutes. Gradually release the pressure. Remove thecolumn from the packing apparatus and place a frit (retaining means) andend fitting onto the open end of the column. The column is now ready foruse

[0055] The microcolumn, in addition to its relatively thin active layer,is also generally able to tolerate flow rates and pressures duringsample injection that are capable of achieving the desired samplecontact time with the active layer. The flow rate and pressure dependsnot only on the support particles employed in layer construction, butalso on the column diameter and upper pressure limit that can betolerated by the chromatographic system. In general, any flow rate andpressure necessary to achieve the desired residence time and toleratedby the chromatographic system employed is within the scope of thepresent invention. Typically, however, the microcolumns may be subjectedto flow rates of between about 0.01 to about 9.0 mL/min and pressuresbetween about 10 to about 6000 psi. More preferably, the pressure isbetween about 100 to about 1500 psi.

[0056] II. Determination of the Free Analyte Fraction

[0057] Encompassed in the method of the invention is a means todetermine the concentration of the free analyte fraction in a samplecomprising a free fraction and a bound fraction. The method entailsgenerating a calibration curve comprising data obtained by analyzing aseries of standards containing a known concentration of the same analytepresent in the sample. The concentration of the free analyte present inthe sample, as described in detail below, is then determined bycomparison to the calibration curve.

[0058] Applicants have found that accurately determining theconcentration of free analyte in a sample preferably involves the rapidand selective extraction of this fraction from the sample beforesignificant release from its bound fraction. Additionally, applicantshave found that this release generally occurs within a few seconds,particularly when the analyte binds a serum protein or other bindingcompound, such as HSA or alpha 1-acid glycoprotein. The affinitymicrocolumns described in detail above, therefore, are particularlysuited for the method of the invention because they are capable ofselectively extracting the free fraction within the millisecond timedomain. The bound fraction, on the other hand, does not bind to theaffinity column and is therefore present in the liquid fraction thatpasses through the column.

[0059] Accordingly, the method of the invention encompasses applying asample to the affinity column (described in detail above) underconditions sufficient to bind the free analyte fraction withoutsignificant interference from its bound fraction, which passes throughthe column without adsorbing. The method, irrespective of theembodiment, also entails applying a series of standards to the sameaffinity column. “Standard” as utilized herein, shall mean a mixturethat contains a known concentration of the analyte. The standard willpreferably comprise the same analyte as is being detected in the sampleand depending upon the embodiment of the invention, may also comprise abinding compound. “Series of Standards” as utilized herein, shall meanapplying from about two to about five standards with different analyteconcentrations to the column. In another embodiment of the invention,the series of standards may be determined without applying the standardsto the column for each application of the method, such as when thecalibration curve has been determined previously (from analysis of thesame standard in an earlier test) or when the standard comes as a partof a kit. The series of standards will preferably contain concentrationsof free analyte that are substantially comparable to the concentrationof free analyte expected to be present in the sample.

[0060] In accordance with the method of the invention, the concentrationof free analyte present in each standard is determined. Thisconcentration may be determined based upon mass or volume measurementsin which a known concentration of pure analyte is weighed and placedinto a known volume of solution. Equally, a known volume of solution maybe diluted or combined with another solution to prepare the finalstandard solution. In addition to these methods, the concentration maybe determined by any means generally known in the art.

[0061] Additionally, the sample and standard, irrespective of theembodiment of the invention, are preferably injected onto the columnunder conditions that optimize a rapid and selective binding of the freeanalyte to the column. A number of conditions may impact the degree offree analyte binding to the column. These conditions are preferablyoptimized to achieve a high rate of binding and generally include: 1) anactive binding agent in the column that is capable of binding the freeanalyte, 2) solution conditions (as set forth in more detail below)preferably favorable for binding to occur, 3) the binding capacity ofthe column is preferably equal to or greater than the concentration offree analyte injected into the column (as discussed above), and 4) theresidence time is typically optimized such that the time is preferablylong enough that a significant concentration of the free analyte bindsto the column and yet, short enough in duration to prevent significantdissociation from the bound fraction. The sample and standards may beapplied to the column by any means generally known in the art, such asthrough the use of an injection valve or autoninjector system.

[0062] In addition to the parameters set forth above impacting bindingcapacity, a number of operating conditions employed during sample andstandard injection onto the column are also preferably optimized. Onesuch operating parameter is selection of the loading and elutionbuffers. The buffers selected preferably mimic the pH and solventconditions of the sample to ensure that the equilibrium between the freeand bound fractions is not disrupted. For example, when a biologicalsample is being analyzed, any physiological buffer, such as phosphatebuffer, may be employed. And, the buffer typically will have a pH ofapproximately 7.2 to about 7.4 (pH of blood, serum or plasma). Thetemperature during injection of standard/sample onto the column is alsoimportant. Again, the temperature will preferably mimic the naturaltemperature of the sample to avoid disrupting the binding properties ofproteins in the sample prior to their application to the affinitycolumn. Additionally, applicants have found that flow rate during sampleinjection can dramatically impact both extraction efficiency anddissociation of analyte from the bound fraction. Typically higher flowrates result in less dissociation, while slower flow rates increaseextraction efficiency. Therefore, an intermediate flow rate ispreferably employed during column injection and one generally skilled inthe art of chromatography can readily determine this rate, which willvary depending upon the particular application. Typically, however, theflow rate is from about 0.1 to about 10.0 ml/min, and even morepreferably, the flow rate is from about 0.5 to about 1.5 ml/min.

[0063] Accordingly, in one embodiment of the invention the concentrationof free analyte present in the sample is determined by analyzing datafrom a series of standards comprising known concentrations of the samefree analyte present in the sample without the presence of any bindingcompounds. In this embodiment, therefore, the concentration of the freefraction is determined by directly analyzing data from the free fractionof the series of standards (“Direct Method”). The sample, as detailedabove, is applied to the column employing the same operating parametersas with injection of standard onto the column. The column separates thesample and series of standards into a free fraction and a bound fractionin the millisecond time domain. As detailed above, the free fraction ofboth the standard and sample is adsorbed to the column, while the boundfraction passes through the column.

[0064] The free analyte fraction of both the standard and sampleisolated by the column is typically then detected as a signal by anymeans generally known in the art of analytical chemistry. “Signal” asutilized herein, shall mean the chemical or physical response thatallows the analyte to be detected (in either the standard or sample).The signal can either be generated by the analyte itself (e.g. seedetection of warfarin in the Example below) or generated by anothercompound that is linked to the analyte (e.g. the use of a labeled analogof an analyte to allow the unlabeled analyte to be detected). Inaddition, the signal is specific to the particular detection methodemployed. The choice of a particular detection method is not critical.However, the detection method employed is preferably the same for boththe standard and sample in order to generate a reliable calibrationcurve. Detection may be performed by either an on-line or off-linemethod. An “on-line” method, as utilized herein, shall mean a method inwhich there is a direct coupling between isolation of the free fraction(via affinity chromatography) and its detection such that the isolatedfraction is automatically transferred to the detection mechanism throughan interface that connects the two systems. An “off-line” method, on theother-hand, as utilized herein, shall mean a method in which theisolated fraction is collected and then manually transferred to thedetection mechanism. Suitable detection methods include immunoassay,mass spectrometry, gas chromatography, and detection based uponultraviolet absorbance, fluorescence detectors, and electrochemicaldetectors. Preferably, however, the detection technique utilized willcomprise an on-line method with direct detection in order to facilitateefficiency of such detection.

[0065] The calibration curve can then be generated after the isolationand subsequent detection of signal, as detailed above, of the standardwith known concentrations of free analyte. The calibration curvecomprises a graph depicting the concentration of free analyte present ineach standard versus the signal detected for each concentration.Additionally, the plot can be generated either manually, with aspreadsheet (e.g. Lotus or Excel) or by employing any computer programgenerally known in the art for linear or non-linear regression.

[0066] The concentration of the free fraction present in the sample canthen be readily determined utilizing the calibration curve delineatedabove by simply comparing the signal detected from the free analytefraction separated from the sample with the array of signals depicted onthe calibration curve. This direct comparison is possible because thecurve depicts the signal for known concentrations of the free fraction(generated from the series of standards). Therefore, the concentrationof the free fraction of the sample may be determined by comparing itssignal to signal depicted in the calibration curve for the standardswith known free analyte concentrations.

[0067] In yet another embodiment, the concentration of the free analytefraction of the sample is determined by analyzing data from a series ofstandards comprising known concentrations of the same free analytepresent in the sample and a binding compound. In this embodiment, incontrast to the Direct Method detailed above, the concentration of thefree fraction of the sample is determined by analyzing data from thebound fraction and a total fraction (described below) from the series ofstandards (“Indirect Method”). In this embodiment, similar to theembodiment delineated above, the sample and series of standards areapplied to the affinity column employing the same operating parameters.The column separates the sample and series of standards into a freefraction and a bound fraction in the millisecond time domain.Additionally, the free fraction of both the standard and sample isadsorbed to the column while the bound fraction passes through thecolumn. In the Indirect Method, in contrast to the Direct method, thebound fraction of both the sample and series of standards is retainedfor further analysis in the next step of the method.

[0068] However, also in contrast to the Direct Method, the Indirectmethod employs the use of an additional inert control column. In thisembodiment, the same sample and series of standards applied to theaffinity column described above are applied to an inert control column.The inert control column comprises a column constructed in all detailslike the affinity column discussed above except that the supportparticles in its active layer are not derivatized with a binding agent.For example, the inert control column and affinity column employed inthis embodiment are the same size, are constructed from the samematerials, and are operated under the same parameters (i.e. pressure andflow rate). However, because the inert control column is not derivatizedwith binding agent, the free analyte fraction is not separated fromeither the sample or series of standards. Instead, a total analytefraction comprising the bound fraction and free fraction pass throughthe column. The total fraction is retained from both the sample andseries of standards for further analysis in the next step of the method.

[0069] The signal of the bound fraction of both the sample and series ofstandards is then detected by any means generally known in the art ofanalytical chemistry, as described in detail above for the DirectMethod. In addition, the signal of the total fraction of both the sampleand series of standards is also detected in accordance with theprocedures described above for the Direct Method.

[0070] In contrast to the Direct Method, the Indirect Method entailsgenerating two calibration curves. The first calibration curve comprisesa graph depicting the concentration of analyte present in the boundfraction for each standard versus the signal detected for eachconcentration. The second calibration curve comprises a -graph depictingthe concentration of analyte present in the total fraction for eachstandard versus the signal detected for each concentration. As describedabove, the calibration curves can be generated either manually, with aspreadsheet (e.g. Lotus or Excel) or by employing any computer programgenerally known in the art for linear or non-linear regression.

[0071] In accordance with the method of the invention, the concentrationof the free analyte fraction present in the sample can then bedetermined utilizing the two calibration curves described above. Theconcentration of the bound analyte fraction present in the sample canreadily be determined by comparing the signal detected for the boundfraction of the sample with the calibration curve depicting the signaldetected from the bound fraction of the series of standards with knownanalyte concentrations. The concentration of the total fraction presentin the sample can also be readily determined by comparing the signaldetected for the total fraction present in the sample with thecalibration curve depicting the signal detected from the total fractionof the series of standards with known analyte concentrations. Finally,per this method, the concentration of free analyte present in the samplecan be determined by simply subtracting the concentration of the boundfraction present in the sample from the concentration of the totalfraction present in the sample.

[0072] The methods of the present invention may be employed to determinethe free analyte fraction of any sample comprising a bound and freefraction, to the extent that the free fraction is capable of beingseparated from the sample, as described herein. A typical applicationfor the method, however, is the clinical analysis of the free fractionof a hormone, drug and other endogenous or exogenous agents present inbiological samples. The method may also be employed for thepharmaceutical analysis of free drug levels or drug metabolite levels inbiological samples. Equally, the method may be employed in toxicologystudies to quantify the free fraction of organic compounds and/orinorganic compounds present in a sample. In a research setting, themethod may be utilized to study the mechanism of protein bindingprocesses.

[0073] The detailed description set-forth above is provided to aid thoseskilled in the art in practicing the present invention. Even so, thisdetailed description should not be construed to unduly limit the presentinvention as modifications and variation in the embodiments discussedherein can be made by those of ordinary skill in the art withoutdeparting from the spirit or scope of the present inventive discovery.

[0074] All publications, patents, patent applications and otherreferences cited in this application are herein incorporated byreference in their entirety as if each individual publication, patent,patent application or other reference were specifically and individuallyindicated to be incorporated by reference.

[0075] Without further elaboration, it is believed that one skilled inthe art can, using the preceding description, utilize the presentinvention to its fullest extent. The following preferred specificembodiments are, therefore, to be construed as merely illustrative, andnot limitative of the remainder of the disclosure in any way whatsoever.

EXAMPLES

[0076] The examples illustrate the ability of the method of the presentinvention to detect the free fraction of warfarin from a samplecomprising warfarin and human serum albumin (“HSA”). Warfarin is oneexample of a drug which has significant binding in blood, and is acommon anticoagulant used in humans for the treatment and prevention ofheart attacks and strokes. It exists in two enantiomeric forms, R-(+)-and S-(−)-warfarin, which are given as a racemic mixture. Both formshave pharmacological activity, but S-warfarin is several times morepotent than the R-enantiomer. In the circulation, R- and S-warfarinexist mainly in their bound forms, with most of this binding occurringwith the protein HSA. Because of warfarin's pharmaceutical significance,binding affinity for HSA, and stereochemistry, it is an excellent modelto illustrate the broad applicability of the method of the currentinvention.

[0077] Materials and Methods

[0078] Reagents.

[0079] The R- and S-warfarin were donated by Dupont Pharmaceuticals(Wilmington, Del.). The polyclonal anti-warfarin antibodies were fromAccurate Chemical (Westbury, N.Y.). The HPLC-grade Nucleosil Si-500 andSi-1000 silica (7 μm particle size, 500 Å and 1000 Å pore size) wasobtained from Alltech (Deerfield, Ill.). The 7-amino-4-coumarin-3-acetylhydrazide (AMCA-hydrazide) and reagents for the bicinchoninic acid (BCA)protein assay (Smith, P. K.; Krohn, R. I.; Hermanson, G. T.; Mallia, A.K.; Gartner, F. H.; Provenzano, M. D.; Fujimoto, E. K.; Goeke, N. M.;Olson, B. J.; Klenk, D. C. Anal. Biochem. 1985, 150, 76.) were fromPierce (Rockford, Ill.). HSA (Cohn fraction V, 99% pure, fatty acidfree) and rabbit immunoglobulin G (IgG) were purchased from Sigma (St.Louis, Mo.). All other chemicals were reagent-grade or better. Allaqueous solutions were prepared using deionized water from a Nanopurewater system (Barnstead, Dubuque, Iowa).

[0080] Apparatus.

[0081] Samples for the BCA protein assay were analyzed using a ShimadzuUV160U absorbance spectrophotometer (Kyoto, Japan). Immunoaffinitycolumns were packed using a modified N60 injection valve from Valco(Houston, Tex.) and a CM3000 HPLC pump from LDC Analytical (RivieraBeach, Fla.). The final chromatographic system used in the analysis offree and bound warfarin consisted of one anti-warfarin immunoaffinitymicrocolumn (prepared as described later) in series with two 5 cm×2.1 mmID Pinkerton GFF II internal surface reversed-phase (ISRP) columns fromRegis Technologies (Morton Grove, Ill.). Detection in thechromatographic system was performed by a Shimadzu RF-535 fluorescencemonitor. Samples were injected by an AS3000 autosampler fromThermoseparations (Schaumberg, Ill.). The application and elutionbuffers for the immunoaffinity column were delivered using PU-980 HPLCpumps from Jasco (St. Louis, Mo.). A LABPro automated six-port valvefrom Rheodyne (Cotati, Calif.) was used to switch between these buffers.An organic modifier for displacement of the HSA-bound warfarin wasintroduced to the effluent of the immunoaffinity column through the useof a post-column mixing tee and a CM3200 pump from LDC Analytical. Thechromatograms were collected on a 300 MHZ Pentium computer from TCE(Hoffman Estates, Ill.) with Winner-on-Windows software fromThermoseparations. The temperature of the system was controlled using aVWRbrand 13L immersion circulating water bath from VWR Scientific (WestChester, Pa.).

[0082] Preparation of Immunoextraction Column.

[0083] Antibodies were purified using AMCA-hydrazide as an affinityligand. AMCA is a coumarin derivative that is similar in structure towarfarin. It was used here to isolate anti-warfarin antibodies fromtheir corresponding antiserum. The AMCA-hydrazide was coupled toNucleosil Si-1000 silica in a manner similar to that reported for thesynthesis of dihydrazide-activated silica (Ruhn, P. F.; Garver, S.;Hage, D. S. J. Chromatogr. A 1994, 669, 9.). The anti-warfarinantibodies were isolated with this support by incubating one milliliterof anti-warfarin antiserum with 300 mg of the AMCA silica for two hoursat room temperature. After incubation, the samples were centrifuged andthe supernatant was removed. The support was then washed with pH 2.5,0.10 M potassium phosphate buffer for 10 min, followed by a secondcentrifugation step. This second supernatant (containing purifiedanti-warfarin antibodies) was then collected, adjusted to pH 7.0 with asmall concentration of 1.0 M sodium hydroxide, and stored at 4° C. untilfurther use.

[0084] Diol-bonded Nucleosil Si-500 silica was prepared as describedpreviously (Ruhn, P. F.; Garver, S.; Hage, D. S. J. Chromatogr. A 1994,669, 9.). The diol coverage of this support was 127±4 (1 SD) μmol/g ofsilica, as determined in replicate by an iodometric capillaryelectrophoresis assay. The purified anti-warfarin antibodies wereimmobilized to this diol-bonded silica by the Schiff base method(Larsson, P. -O. Methods Enzymol. 1984, 104, 2121.). The protein contentof the resulting immunoaffinity support was determined by a BcA assay tobe 2.05±0.05 mg antibodies/g silica (or 14 nmol/g), using rabbit IgG asthe standard and diol-bonded silica as the blank.

[0085] The anti-warfarin immunoaffinity support was used to pack asandwich microcolumn, as described herein. This column had an innerdiameter of 2.1 mm and a total length of 1.0 cm, with a 1.1 mm portioncontaining the immunoaffinity support and the remainder containing aninert layer of diol-bonded silica. The immunoaffinity layer was placedwithin this column by making thirty-two 250 μL injections of a 0.3 mg/mLslurry of the anti-warfarin support in pH 7.0, 0.10 M phosphate buffer.The remainder of the column was filled in a similar manner withdiol-bonded Nucleosil 500.

[0086] Chromatographic Studies.

[0087] The extraction studies were performed by making 20 μL injectionsof 0.8-5×10⁻⁷ M warfarin at flow rates ranging from 0.5 to 3.0 mL/min.Five replicate injections were made at each flow rate using microcolumnsthat contained the immunoaffinity support or only diol-bonded silica.The non-retained peaks observed with the immunoaffinity column werecompared to those seen on the dial column to determine the relativeconcentration of warfarin that had been removed by the immobilizedantibodies. The application buffer in these studies was pH 7.0, 0.10 Mpotassium phosphate and the elution buffer was pH 2.5, 0.10 M potassiumphosphate. Between injections, the immunoaffinity column was washed for5 min with the elution buffer at 1.0 mL/min and was allowed toregenerate for 10 min in the application buffer at 1.0 mL/min.

[0088] The separation of HSA and HSA-bound warfarin was studied byinjecting 20 μL of warfarin/HSA mixtures onto a dial microcolumn thatwas in series with two ISRP columns. The samples in this study contained0-3.5×10⁻⁵ M warfarin and 3 mg/mL (4.5×10⁻⁵ M) HSA in pH 7.0, 0.10 Mphosphate buffer. These samples were injected at 1.0 mL/min in thepresence of the pH 7.0 application buffer. A separate solvent stream wasintroduced directly after the microcolumn using a three-way mixing tee.In the final optimized system, this second solvent stream contained 7.5%1-propanol in pH 7.0, 0.10 M phosphate buffer and was added at a flowrate of 0.2 mL/min to induce dissociation of HSA-bound warfarin. Thesame chromatographic system was used to determine the concentration offree warfarin in warfarin/HSA mixtures by replacing the diol column withthe immunoaffinity microcolumn. A series of twenty replicate injectionswere made in this experiment using samples that contained well-definedconcentrations of R- or S-warfarin and HSA. The non-retained peak areasfor the warfarin in these samples were then compared to the areasobtained for warfarin/HSA standards with the diol column.

[0089] Computer Simulations.

[0090] The simulations of warfarin extraction and dissociation wereperformed on an IBM- compatible computer using programs written in TurboC++ (Borland International, Scotts Valley, Calif.). This wasaccomplished by using a grid propagation algorithm that has previouslybeen used to examine the adsorption of analytes to immobilizedantibodies and similar ligands in affinity columns. This algorithm wasmodified to include the reversible binding of an analyte to an agent inthe mobile phase. In this method, the column was divided into a largenumber of slices of equal width. As an analyte moved through thiscolumn, its binding to the immobilized ligand and soluble agent in eachslice was described by using mass balance and the differential equationsfor the rates of these reactions. This system of equations was solvedfor that particular slice and interval of time by using a fourth-orderRunga-Kutta method (Margenau, H.; Mosely, G. M. The Mathematics ofPhysics and Chemistry; Van Nostrand; Princeton, 1956.). Flow through thecolumn was simulated after each iteration by taking the compounds thatremained in the mobile phase and moving these onto the next slice. Theprocess of distributing and moving the analytes was repeated until allof the analyte had either bound to the immobilized ligand or had leftthe column. The relative concentration of analyte that had adsorbed tothe column was then calculated, thus providing the retained fraction.Convergence of these results was tested by performing a series ofrelated simulations in which the column was divided into an increasingnumber of slices but with a decreasing concentration of time being usedper iteration in each slice. This gave a maximum estimated error of lessthan 0.2% in the calculated concentration of retained analyte.

Example 1

[0091] Initial Selection of Conditions for Free Drug Extractions.

[0092] Previous reports have measured the equilibrium and rate constantsfor the binding and dissociation of R- and S-warfarin with HSA under avariety of conditions (Loun, B.; Hage, D. S. Anal. Chem. 1994, 66, 3814and Loun, B.; Hage, D. S. Anal. Chem. 1996, 68, 1218.). Based on thisinformation, it was possible to estimate the time needed to remove thefree fraction of warfarin from a warfarin/HSA mixture without havingthis fraction contain a significant concentration of warfarin that hadbeen released from its protein-bound form. Some plots that were used tostudy the extent of this dissociation process are shown in FIG. 4 Theseparticular results were calculated for S-warfarin at 25° C. underconditions similar to those used in this study. This type of plot wasalso generated for R-warfarin, which has a slightly faster rate ofdissociation from HSA under the given experimental conditions.

[0093] The model used in FIG. 4 assumes 1) that there is aninstantaneous removal of all free warfarin from the initial sample, 2)that any warfarin which is later released from its complex with HSA willbind immediately to the extraction column, and 3) that the concentrationof extracted warfarin is much smaller than the binding capacity of thecolumn. Based on this model, it was found that roughly 75% of theS-warfarin that was originally bound to HSA would be released from thisprotein and adsorbed to the extraction column within 10 s. Thisindicated that ordinary immunoaffinity extractions, which often takeseveral minutes to perform, (Hage, D. S. J. Chromatogr. B 1998, 715, 3.)would be much too long for separating the free and bound fractions ofS-warfarin. An expanded view of this dissociation process, illustratedin FIG. 4(b), indicated that extraction times of only a few hundredmilliseconds would be required to isolate the free fraction ofS-warfarin while avoiding any appreciable contamination by warfarin thathad been later released from HSA. The same conclusion was reached incalculations that were performed for R-warfarin.

[0094] Although it was useful in FIG. 4 to assume that there was anexcess of binding sites in the column and that there was immediateremoval of any non-complexed warfarin from solution, this does representa worst-case scenario and probably resulted in estimates for the usableextraction times which were smaller than those that might be possible inpractice. For instance, either the presence of a finite number ofbinding sites in the column or a finite rate of adsorption for thenon-complexed warfarin would reduce any perturbation of the HSA-boundfraction of warfarin as this passes through the immunoaffinity column.The same thing would happen if the warfarin in solution were allowed toreassociate with HSA instead of being removed by the column. The effectsof eliminating these assumptions will be considered through the use ofcomputer simulations. However, the model used in FIG. 4 was still foundto be a good starting point for estimating the conditions needed in animmunoaffinity column for isolating a drug's free fraction.

[0095] Design of Immunoaffinity Column.

[0096] Based on FIG. 4 , an extraction time of less than 200 ms was setas the initial goal for the removal of free warfarin from warfarin/HSAmixtures at room temperature. Under these conditions, an error of lessthan 20-40% in the measured free fractions of R- and S-warfarin wasexpected due to the dissociation of their protein-bound fractions. Inorder to work within this time frame it was necessary to prepare acolumn that was capable of operating in the millisecond time domain.This was accomplished by using a sandwich microcolumn that was preparedas described herein. This consisted of a 2.1 mm ID×1.0 cm tube that waspacked with a 1.1 mm thick layer of a support that contained immobilizedanti-warfarin antibodies. The remainder of the column was filled withdiol-bonded silica. The purpose of the immunoaffinity support was toextract warfarin from samples, while the diol-bonded silica was used tohold the immunoaffinity support in place and to provide uniform sampleapplication to this layer.

[0097] In this type of column the actual time over which free drugextraction and sample perturbation takes place is represented by thetime during which any given part of the --sample passes through theimmunoaffinity layer. For instance, an effective extraction time of 200ms or less would be obtained by using a flow rate of at least 0.9 mL/minon a 2.1 mm ID column that contains a 1.1 mm layer of an immunoaffinitysupport. This is well within the range of usable conditions for thesecolumns, which have been operated at flow rates as high as 9-10 mL/min.

[0098] The binding capacity of the immunoaffinity columns also had to beconsidered to ensure that overloading did not occur when warfarinsamples were injected onto these columns. The concentration of warfarinbinding sites in one anti-warfarin microcolumn was estimated to be 50pmol. Although this is a relatively small concentration of ligand, it isstill three-to-five times larger than the concentration of free warfarinthat was applied in any sample, thus indicating that these columns didhave a sufficient binding capacity for this present study. This wasconfirmed experimentally by measuring the maximum concentration ofwarfarin that could bind to the microcolumn as the concentration ofinjected warfarin was varied.

[0099] One question that remained was whether this type of microcolumncould be used to extract warfarin on the millisecond time scale. Thiswas tested by injecting samples that contained only R- or S-warfarin atvarious flow rates. The results obtained on the immunoaffinity columnwere then compared to those observed for the same samples and flow rateson an inert control column. FIG. 5 shows an example of such a study. Itwas found that in 120 ms there was 95% extraction of a 5×10⁻⁷ M warfarinsample (i.e., a concentration corresponding to the free warfarin contentexpected for the warfarin/HSA mixtures examined later in this report).At even lower concentrations, such as the 8×10⁻⁸ M warfarin sample shownin FIG. 5, essentially complete extraction was possible in 60 ms. Thus,it was concluded that immunoaffinity microcolumns could be used toextract warfarin on the same time scale that was needed for separatingwarfarin's free and protein-bound fractions.

Example 2

[0100] Separation of Free and Bound Warfarin Fractions.

[0101] The next section of this study began to examine the use of animmunoaffinity microcolumn to measure the free drug fractions ofmixtures that contained known concentrations of HSA and R- orS-warfarin. This was to be done by monitoring the fluorescence of anywarfarin that passed non-retained through the immunoaffinity column. Onedifficulty with this approach is that warfarin has a significant changein its degree of fluorescence when it is in solution versus bound toHSA. This, plus the inherent fluorescence of HSA, created a problem indetection because the non-retained samples were expected to contain amixture of HSA, HSA-bound warfarin, and warfarin that had dissociatedfrom HSA.

[0102] The approach used to overcome this problem was to pass thenon-retained sample peaks through a series of ISRP (internal surfacereversed-phase) columns. This was done by using the system illustratedin FIG. 6. Although all of the bound warfarin would eventually bereleased from HSA in such a system, a dissociating agent (1-propanol)was added to the microcolumn effluent to increase the rate of thisprocess. The 1-propanol also acted as an organic modifier to aid in theelution of components on the ISRP columns.

[0103] A typical chromatogram for this system is shown in FIG. 7. Asdemonstrated in earlier studies, proteins like HSA are too large to fitin the pores of an ISRP column and will elute in its excluded volume.However, smaller molecules like warfarin can enter these pores andinteract with the hydrophobic phase that is located there. This willcause these molecules to be retained and to elute after proteins fromthese columns. In the case of this study, the second peak was muchbroader than the first since it was produced by warfarin that enteredthe pores at different points along the column as it began to undergodissociation from HSA.

[0104] ISRP columns have been used alone for the analysis of free andbound warfarin in the presence of bovine serum albumin. In these earlierstudies, the free warfarin was retained at the beginning of the ISRPcolumn, while the bound fraction underwent dissociation from albumin andwas retained further downstream. It was shown that this resulted inthree overlapping peaks: the first representing the non-retainedprotein, the second corresponding to warfarin which dissociated fromthis protein, and the third (and slowest eluting peak) representingwarfarin's initial free fraction. It is important to note in thispresent study that the free warfarin peak was not observed on the ISRPcolumn when the samples had previously passed through the immunoaffinitycolumn. This occurred because the free fraction had now been removedfrom these samples. This allowed a much cleaner separation to beobtained between the bound and free fractions of this drug and itsbinding proteins than was reported when using only ISRP supports.

[0105] Various factors were adjusted to obtain the separation shown inFIG. 7. The rate of warfarin dissociation from HSA was increased in theISRP column by adding 1-propanol to the effluent of the immunoaffinitycolumn. This resulted in a sharper peak for the bound warfarin fractionsince it was now released over a shorter distance within the ISRPcolumn. A 7.5% solution of 1-propanol was found to be optimum for thispurpose since it allowed complete dissociation of warfarin from HSA in areasonable time while still providing a large enough difference inretention for their separation. A longer length for the ISRP support wasalso employed (going from one 5 cm long column to two 5 cm columns) toincrease the efficiency of this system and its ability to resolve theHSA and bound warfarin peaks. The result was a separation in whichbaseline resolution was obtained within 5 min of sample injection.

[0106] One small problem in using multiple ISRP columns was that thisincreased the back pressure of the overall chromatographic system. Thisplaced a limit on the maximum flow rate and minimum sample residencetime that could be used with the immunoaffinity microcolumn. As acompromise between extraction time, sample throughput and these pressurelimitations, an injection flow rate of 1.0 mL/min was chosen for thefinal system. This gave a residence time of 180 ms for samples in theimmunoaffinity column. As noted earlier, this concentration of time notonly was sufficient to allow the quantitative extraction of warfarin,but it also fell within the range of 200 ms or less that was initiallyselected for use in separating warfarin's free and bound fractions.

Example 3

[0107] Analysis of Free Warfarin Fractions.

[0108] The fourth phase of this study used the immunoaffinity and ISRPsystem to measure the concentration of free warfarin in known mixturesof warfarin and HSA. To quantitate the free warfarin in these samples,standard curves were first prepared in which various concentrations ofR- or S-warfarin were mixed with HSA. These mixtures were then injectedonto the system shown in FIG. 6, with diol-bonded silica being used inplace of the immunoaffinity support in the extraction column. The areaof the warfarin that eluted from the ISRP columns (now corresponding toboth the bound and free warfarin fractions) was measured and plotted asa function of the total warfarin concentration in the sample. Both R-and S-warfarin gave linear responses in these plots with correlationcoefficients of 0.9991-0.9993 for ten samples that contained warfarinconcentrations of 0-1.7×10⁻⁵ M. The lower limit of detection of thismethod for these enantiomers was about 0.5-1×10⁻⁸ M (S/N=2). Thisdetection limit was 50 to 100-fold smaller than the free warfarinconcentrations which were measured in this study.

[0109] The warfarin and HSA mixtures that were being used as testsamples were now injected onto the same system in the presence of 1) amicrocolumn that contained only diol-bonded silica or 2) theimmunoaffinity column that had previously been developed for themillisecond-scale extraction of warfarin. The peak area obtained withthe diol column allowed the total concentration of warfarin in thesample to be determined. The area measured after extraction by theimmunoaffinity column allowed the concentration of bound warfarin to beestimated. By combining these two values it was then possible tocalculate the concentration of free warfarin in the sample.

[0110] This approach was tested by injecting a set of samples thatcontained 0.95-1.10×10⁻⁵ M R- or S-warfarin and 4.5×10⁻⁵ M HSA. Both theR- and S-warfarin samples were injected twenty times onto the diolcolumn and immunoaffinity column. This gave relative standard deviationsof ±4-6% for their measured peak areas on the ISRP system. The freefractions that were obtained for these samples are shown in Table 2,below. For R-warfarin, the free fraction was determined to be 11.8±0.6%at 25° C. (or a bound fraction of 88.2%), while for S-warfarin the freefraction was 5.9±0.2% (or 94.1% bound).

[0111] Table 2. Measured and Predicted Free Fractions for R- andS-warfarin in Samples Containing Known Mixtures of Warfarin and HAS^(a)TABLE 2 Measured and predicted free fractions for R- and S-warfarin insamples containing known mixtures of warfarin and HSA^(a) Measured FreePredicted free Compound Fraction Fraction^(b) R-Warfarin 11.8 (±0.6)% 10(±2)% S-Warfarin  5.9 (±0.2)%  7 (±1)%

[0112]^(a)All values shown in parentheses represent a range of ±1 SD.^(b)The predicted free fractions were determined by using the knowncompositions of the samples and equilibrium constants which havepreviously been measured for the binding of warfarin enantiomers to HSAat 25° C. The equilibrium constants that were used for R- and S-warfarinwere 2.6 (±0.1)×10⁵ M⁻¹ and 3.4 (±0.1)×10⁵ M⁻¹, respectively.

[0113] The accuracy of these free fractions was evaluated by comparingthem with the predicted results for these samples. This was accomplishedby using the known composition of these samples and equilibriumconstants that have previously been determined for the binding of R- andS-warfarin to HSA under conditions similar to those used in this study(Loun, B.; Hage, D. S. Anal. Chem. 1994, 66, 3814.). It was assumed inthese calculations that essentially all of the HSA was active; this wasconfirmed experimentally through the use of fluorescence and asolution-phase titration of the HSA with increasing concentrations ofwarfarin. For R-warfarin, it was predicted that approximately 10±2% ofthis drug would be in the free form at equilibrium for the given samplecomposition, while for S-warfarin a predicted free fraction of 7±1 wasobtained. Both predicted results were within one standard deviation ofthe experimental free fractions, thus indicating that there was goodagreement between these values.

[0114] An inherent assumption made throughout this project was that theanti-warfarin antibodies in the immunoaffinity column would be able todistinguish between the free warfarin in solution and its HSA-boundfraction. For this to be true, these antibodies would have to interactwith regions in the structure of warfarin that were not exposed whenthis drug was complexed with HSA. The agreement between the actual andpredicted results in Table 2 indicates that this was indeed the case.This specificity for the free versus bound fractions was not surprisingin the case of R-warfarin, which is believed to interact deep within itsbinding site on HSA. But a similar specificity was noted for S-warfarin,which is thought to interact more with HSA's outer surface. This resultindicates that it should be possible to use immunoaffinitychromatography to isolate the free fractions of drugs that have avariety of different orientations in their drug-protein complexes.However, as a precaution, it is still recommended that antibodyspecificity always be considered for any new compounds that are to beexamined by this analytical technique.

Example 4

[0115] Simulation of Warfarin Extraction and Dissociation.

[0116] After the free fractions of R- and S-warfarin had been determinedin test samples, a comparison was made between the accuracy of thesevalues and the errors that had been anticipated due to the dissociationof bound warfarin during such measurements. For instance, thedifferences in the measured and predicted free fractions in Table 2(+18% for R-warfarin and −16% for S-warfarin) were much smaller than theerrors of 20-40% that were expected from FIG. 4 and related plots atcomparable extraction times. It was suspected from this that theseearlier graphs had overestimated the role played by dissociation effectsduring the isolation of free drug fractions by immunoaffinitychromatography.

[0117] A more complete picture of the immunoaffinity extraction processwas obtained through the use of computer simulations. This wasaccomplished by developing a model which no longer made the sameassumptions that were used in FIG. 4. For instance, this model allowedthe free and dissociated warfarin to undergo a continuous (rather thaninstantaneous) extraction on the immunoaffinity microcolumn. It was alsonow possible to consider the use of a column with a finite bindingcapacity and samples in which any non-complexed warfarin could bind toHSA instead of the immobilized antibodies. This was accomplished byadapting a previous algorithm that has been used to study the adsorptionof analytes to affinity supports, (Hage, D. S.; Walters, R. R. J.Chromatogr. 1988, 436, 111; Rollag, J. G.; Hage, D. S. J. Chromatogr. A1998, 795, 185; and Hage, D. S.; Thomas, D. H.; Roy Chowdhuri, A.;Clarke, W. Anal. Chem. 1999, 71, 2965.) with the inclusion of areversible solution-phase reaction between the injected drug and itsbinding proteins. Further details on this approach can be found in theMethods and Materials.

[0118]FIG. 8 shows the simulation results that were obtained forR-warfarin. Similar plots were generated for S-warfarin. The sample andcolumn conditions that were used in these simulations were the same asthose that were present in the experimental determination of the freewarfarin fractions. The rate constant for adsorption of warfarin to theimmobilized antibodies was estimated from the earlier studies thatexamined the extraction of R- and S-warfarin by the immunoaffinitycolumn.

[0119] The lower plot in FIG. 8 shows how the extraction efficiency ofwarfarin was predicted to change as this drug was injected at variousflow rates. This extraction had its highest efficiency at low flow ratesand a decreasing efficiency at higher flow rates. This occurs becausethere is a smaller contact time between the sample and the immobilizedantibodies as higher application flow rates are used.

[0120] The top plot in FIG. 8 shows how the relative concentration ofextracted warfarin compared to the true free fraction in warfarin/HSAmixtures when the bound warfarin in these samples was allowed to undergodissociation and rebinding to the HSA. As expected, higher flow ratesand shorter column residence times resulted in less dissociationeffects. This, in turn, allowed the concentration of extracted warfarin(free plus dissociated warfarin) to approach the concentration of freewarfarin that was actually removed from the sample.

[0121] One observation that can be made by comparing the two plots inFIG. 8 is that there will be an optimum flow rate range over which thebest estimates can be made of a drug's true free fraction. For instance,FIG. 8 shows that the extent of warfarin dissociation from HSA will beminimized by operating at high flow rates; however, this decreasesextraction of the free warfarin fraction. Working at slower flow ratesprovides a better extraction efficiency but suffers from greater errorsdue to bound drug dissociation. It is only at intermediate flow ratesthat a balance is obtained between accuracy and extraction recovery. Inthis particular case, it was predicted that a flow rate range of roughly0.9-1.6 mL/min was needed to obtain an error of +15% or less in themeasured free fractions. This compares well with the approximate errorsof +18% and -16% that were estimated for R- and S-warfarin under theseflow rate conditions.

[0122] Another observation that can be made from FIG. 8 is that the freefraction errors predicted by the simulations were less than those thatwere originally estimated through the use of simple drug-proteindissociation. For instance, it was determined from FIG. 4 thatdissociation of S-warfarin from HSA would increase the measured freefraction of this drug by 25-30% at an extraction time of 180 ms.However, the more complete model used in the simulations indicated thata maximum error of only 15% would be expected.

[0123] In light of the detailed description of the invention and theexamples presented above, it can be appreciated that the several aspectsof the invention are achieved.

[0124] It is to be understood that the present invention has beendescribed in detail by way of illustration and example in order toacquaint others skilled in the art with the invention, its principles,and its practical application. Particular formulations and processes ofthe present invention are not limited to the descriptions of thespecific embodiments presented, but rather the descriptions and examplesshould be viewed in terms of the claims that follow and theirequivalents. While some of the examples and descriptions above includesome conclusions about the way the invention may function, the inventordoes not intend to be bound by those conclusions and functions, but putsthem forth only as possible explanations.

[0125] It is to be further understood that the specific embodiments ofthe present invention as set forth are not -intended as being exhaustiveor limiting of the invention, and that many alternatives, modifications,and variations will be apparent to those of ordinary skill in the art inlight of the foregoing examples and detailed description. Accordingly,this invention is intended to embrace all such alternatives,modifications, and variations that fall within the spirit and scope ofthe following claims.

What is claimed is:
 1. A method to determine the concentration of a freeanalyte fraction in a sample, the sample comprising a bound analytefraction and the free analyte fraction, the method comprising: (a)applying the sample to an affinity column wherein the column separatesthe free analyte fraction from the sample in the millisecond timedomain; (b) detection of signal from the free analyte fraction separatedfrom the sample; and (c) determining the concentration of free analytepresent in the sample.
 2. The method of claim 1 wherein the affinitycolumn comprises an active layer, the active layer comprising supportparticles derivatized with a binding agent.
 3. The method of claim 2wherein the active layer is from about 10 microns to about 1.1millimeters in length.
 4. The method of claim 2 wherein the active layeris not less than 60 microns in length.
 5. The method of claim 2 whereinthe binding agent is selected from the group of agents consisting ofantibodies, aptamers, antibody fragments, synthetic molecular imprints,antibody related molecules and recombinant proteins.
 6. The method ofclaim 5 wherein the binding agent is antibodies.
 7. The method of claim2 wherein the binding agent has a high binding affinity for the freeanalyte fraction.
 8. The method of claim 7 wherein the binding agent hasa binding affinity for the free analyte fraction from about 10² to about10⁶ M⁻¹.
 9. The method of claim 7 wherein the binding agent has abinding affinity for the free analyte fraction greater than about 10⁶M⁻¹.
 10. The method of claim 1 wherein the free analyte fraction isseparated from the sample from about 1 to about 500 milliseconds afterinjection of the sample into the microcolumn.
 11. The method of claim 1wherein the free analyte fraction is separated from the sample fromabout 1 to about 100 milliseconds after injection of the sample into themicrocolumn.
 12. The method of claim 1 wherein the signal is detected byan off-line method or an on-line method.
 13. The method of claim 1wherein the signal is detected by an on-line method with directdetection.
 14. The method of claim 1 wherein the signal is detected by amethod selected from the group consisting of immunoassay, massspectrometry, gas chromatography, ultraviolet absorbance, fluorescencedetectors, and electrochemical detectors.
 15. A method to determine theconcentration of a free analyte fraction in a sample, the samplecomprising a bound analyte fraction and a free analyte fraction, themethod comprising: (a) applying the sample to an affinity column, thecolumn separating the sample into the free analyte fraction and thebound analyte fraction in the millisecond time domain wherein the freeanalyte fraction is adsorbed to the column and the bound analytefraction passes through the column; (b) applying a series of standardsto the affinity column wherein each standard applied comprises a knownconcentration of the same free analyte present in the sample, the columnseparating each of the standards into a free fraction and a boundfraction in the millisecond time domain wherein the free fraction isadsorbed to the column and the bound fraction passes through the column;(c) detection of signal from the free analyte fraction separated fromthe sample in (a) above; (d) detection of signal from the free analytefraction separated from the standard in (b) above; (e) generating acalibration curve based upon the signal detected in (d) above, the curvecomprising a graph of the concentration of free analyte present in eachstandard versus the signal detected for each concentration; and (f)determining the concentration of the free analyte fraction present inthe sample by comparing the signal detected in (c) above with thecalibration curve in (e) above.
 16. The method of claim 15 whereincalibration curve is generated from a standard with about 2 to about 5different concentrations of free analyte.
 17. The method of claim 15wherein the sample and standard are applied to the column under the sameoperating conditions.
 18. The method of claim 15 wherein the detectionof signal from the free analyte fraction of the sample and the freeanalyte fraction of the standard is by the same method.
 19. The methodof claim 18 wherein the signal is detected by a method selected from thegroup consisting of immunoassay, mass spectrometry, gas chromatography,ultraviolet absorbance, fluorescence detectors, and electrochemicaldetectors.
 20. The method of claim 15 wherein the affinity columncomprises an active layer, the active layer comprising support particlesderivatized with a binding agent.
 21. The method of claim 20 wherein theactive layer is from about 10 microns to about 1.1 millimeters inlength.
 22. The method of claim 20 wherein the active layer is not lessthan 60 microns in length.
 23. The method of claim 20 wherein thebinding agent a is selected from the group of agents consisting ofantibodies, aptamers, antibody fragments, synthetic molecular imprints,antibody related molecules and recombinant proteins.
 24. The method ofclaim 23 wherein the binding agent is antibodies.
 25. The method ofclaim 20 wherein the binding agent has a high binding affinity for thefree analyte fraction.
 26. The method of claim 25 wherein the bindingagent has a binding affinity for the free analyte fraction from about10² to about 10⁶ M⁻¹.
 27. The method of claim 25 wherein the bindingagent has a binding affinity for the free analyte fraction greater thanabout 10⁶ M⁻¹.
 28. The method of claim 15 wherein the free analytefraction is separated from the sample from about 1 to about 500milliseconds after injection of the sample into the microcolumn.
 29. Themethod of claim 15 wherein the free analyte fraction is separated fromthe sample from about 1 to about 100 milliseconds after injection of thesample into the microcolumn.
 30. A method to determine the concentrationof a free analyte fraction in a sample, the sample comprising a boundanalyte fraction and a free analyte fraction, the method comprising: (a)applying the sample to an affinity column, the column separating thesample into the free analyte fraction and the bound analyte fraction inthe millisecond time domain wherein the free analyte fraction isadsorbed to the column and the bound analyte fraction passes through thecolumn; (b) applying the sample set forth in (a) to an inert controlcolumn wherein the free analyte fraction does not adsorb to the columnand a total analyte fraction comprising the free analyte fraction andthe bound analyte fraction passes through the column; (c) applying aseries of standards to the affinity column wherein each standard appliedcomprises a known concentration of the same analyte present in thesample, the column separating each of the standards into a free fractionand a bound fraction in the millisecond time domain wherein the freefraction is adsorbed to the column and the bound fraction passes throughthe column; (d) applying the same series of standards set forth in (c)to an inert control column wherein the free analyte fraction does notadsorb to the column and a total analyte fraction comprising the freeanalyte fraction and the bound analyte fraction passes through thecolumn; (e) detection of signal from the bound analyte fraction of thesample in (a) above; (f) detection of signal from the total analytefraction of the sample in (b) above; (g) detection of signal from thebound fraction of the standard in (c) above; (h) detection of signalfrom the total analyte fraction of the standard in (d) above; (i)generating a calibration curve based upon the signal detected in (g)above, the curve comprising a graph of the bound concentration ofanalyte present in each standard versus the signal detected for eachconcentration; (j) generating a calibration curve based upon the signaldetected in (h) above, the curve comprising a graph of the totalconcentration of analyte present in each standard versus the signaldetected for each concentration; (k) determining the bound analytefraction in the samples by comparing the signal in (e) above with thecalibration curve in (i) above; (l) determining the total analytefraction in the samples by comparing the signal in (f) above with thecalibration curve in (j) above; and (m) determining the concentration ofthe free analyte fraction present in the sample by subtracting the boundanalyte fraction in (k) above from the total analyte fraction in (l)above.
 31. The method of claim 30 wherein calibration curve is generatedfrom a standard with about 2 to about 5 different concentrations of freeanalyte.
 32. The method of claim 30 wherein the sample and standard areapplied to the column under the same operating conditions.
 33. Themethod of claim 30 wherein the detection of signal from the free analytefraction of the sample and the free analyte fraction from the standardis by the same method.
 34. The method of claim 33 wherein the signal isdetected by a method selected from the group consisting of immunoassay,mass spectrometry, gas chromatography, ultraviolet absorbance,fluorescence detectors, and electrochemical detectors.
 35. The method ofclaim 30 wherein the affinity column comprises an active layer, theactive layer comprising support particles derivatized with a bindingagent.
 36. The method of claim 35 wherein the active layer is from about10 microns to about 1.1 millimeters in length.
 37. The method of claim35 wherein the active layer is not less than 60 microns in length. 38.The method of claim 35 wherein the binding agent is selected from thegroup of agents consisting of antibodies, aptamers, antibody fragments,synthetic molecular imprints, antibody related molecules and recombinantproteins.
 39. The method of claim 38 wherein the binding agent isantibodies.
 40. The method of claim 35 wherein the binding agent has ahigh binding affinity for the free analyte fraction.
 41. The method ofclaim 40 wherein the binding agent has a binding affinity for the freeanalyte fraction from about 10² to about 10⁶ M⁻¹.
 42. The method ofclaim 40 wherein the binding agent has a binding affinity for the freeanalyte fraction greater than about 10⁶ M⁻¹.
 43. The method of claim 30wherein the free analyte fraction is separated from the sample fromabout 1 to about 500 milliseconds after injection of the sample into themicrocolumn.
 44. The method of claim 30 wherein the free analytefraction is separated from the sample from about 1 to about 100milliseconds after injection of the sample into the microcolumn.
 45. Amethod to determine the concentration of a free analyte fraction in asample, the sample comprising a bound analyte fraction and the freeanalyte fraction, the method comprising: (a) applying the sample to anaffinity column wherein the column separates the free analyte fractionfrom the sample in the millisecond time domain; (b) detection of signalfrom the free analyte fraction separated from the sample; and (c)comparing the signal detected in (b) to a standard thereby determiningthe concentration of free analyte present in the sample.